STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpen_0807KEGG: vfi:VFA0477 hypothetical protein. (327 aa)    
Predicted Functional Partners:
Tpen_0806
Uncharacterized protein probably involved in trehalose biosynthesis-like protein; KEGG: ape:APE2310 hypothetical protein.
       0.773
Tpen_0530
SMART: actin/actin family protein; KEGG: pai:PAE2276 hypothetical protein.
  
     0.527
Tpen_0808
PFAM: type II secretion system protein E; KEGG: ape:APE2208 hypothetical protein.
       0.523
Tpen_0640
PFAM: Oligosaccharyl transferase, STT3 subunit; KEGG: pai:PAE3030 oligosaccharyl transferase STT3 homolog.
  
     0.503
Tpen_1600
PFAM: PhoU family protein; KEGG: pab:PAB0144 putative phosphate regulatory protein.
  
     0.463
Tpen_1311
KEGG: mba:Mbar_A3238 hypothetical protein.
  
     0.458
Tpen_1797
Transporter; KEGG: mta:Moth_1233 transporter.
  
     0.456
Tpen_0544
Membrane protein-like protein; KEGG: pai:PAE0653 hypothetical protein.
  
     0.452
Tpen_1374
Hypothetical protein.
  
     0.413
Your Current Organism:
Thermofilum pendens
NCBI taxonomy Id: 368408
Other names: T. pendens Hrk 5, Thermofilum pendens Hrk 5, Thermofilum pendens str. Hrk 5, Thermofilum pendens strain Hrk 5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.