STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpen_0826PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: tko:TK1108 phosphohexomutase. (452 aa)    
Predicted Functional Partners:
Tpen_0827
PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: cac:CAC2981 mannose-1-phosphate guanyltransferase (pyrophosphorylase domain and phosphomannomutase domain).
  
 0.993
Tpen_0113
PFAM: Nucleotidyl transferase; KEGG: ape:APE0255 mannose-1-phosphate guanyltransferase.
  
 0.964
Tpen_0825
KEGG: pai:PAE2237 hypothetical protein.
       0.757
Tpen_1726
PFAM: Nucleotidyl transferase; KEGG: pai:PAE2968 sugar-phosphate nucleotidyl transferase, putative.
 
  
 0.669
Tpen_0407
KEGG: tko:TK0871 ornithine carbamoyltransferase; TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
  
  
 0.554
Tpen_1712
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
 
 0.519
pgk
PFAM: phosphoglycerate kinase; KEGG: mth:MTH1042 phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
 
   
 0.512
Tpen_1778
PFAM: glycosyl transferase, group 1; KEGG: pai:PAE3422 starch phosphorylase.
  
  
 0.511
Tpen_0792
Starch synthase; PFAM: glycosyl transferase, group 1; Starch synthase catalytic domain protein; KEGG: sai:Saci_1201 glycosyl transferase.
  
  
 0.501
Tpen_0660
TIGRFAM: bifunctional phosphoglucose/phosphomannose isomerase; PFAM: sugar isomerase (SIS); KEGG: swo:Swol_0260 bifunctional phosphoglucose/phosphomannose isomerase.
 
  
 0.485
Your Current Organism:
Thermofilum pendens
NCBI taxonomy Id: 368408
Other names: T. pendens Hrk 5, Thermofilum pendens Hrk 5, Thermofilum pendens str. Hrk 5, Thermofilum pendens strain Hrk 5
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