STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpen_1025Hypothetical protein. (133 aa)    
Predicted Functional Partners:
Tpen_1022
Hypothetical protein.
       0.773
Tpen_1023
Rad51-like protein; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules.
       0.773
Tpen_1024
Hypothetical protein.
       0.773
Tpen_1021
Conserved hypothetical protein; KEGG: afu:AF1598 A. fulgidus predicted coding region AF1598.
       0.648
tmk
PFAM: thymidylate kinase; KEGG: pfu:PF1730 dTMP kinase.
       0.551
Tpen_1020
Hypothetical protein.
       0.432
Tpen_1027
PFAM: phospholipase D/Transphosphatidylase; KEGG: tko:TK1563 phospholipase D-related protein.
       0.404
Tpen_1028
KEGG: ape:APE1194 hypothetical protein.
       0.404
Tpen_1029
PFAM: AIR synthase related protein domain protein; KEGG: mta:Moth_0697 AIR synthase related protein-like.
       0.404
Your Current Organism:
Thermofilum pendens
NCBI taxonomy Id: 368408
Other names: T. pendens Hrk 5, Thermofilum pendens Hrk 5, Thermofilum pendens str. Hrk 5, Thermofilum pendens strain Hrk 5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.