STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpen_1071PFAM: NADH-ubiquinone oxidoreductase, chain 49kDa; NADH dehydrogenase (ubiquinone), 30 kDa subunit; KEGG: rru:Rru_A0316 NADH-ubiquinone oxidoreductase. (537 aa)    
Predicted Functional Partners:
Tpen_1070
TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: tte:TTE0125 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases; Belongs to the complex I 20 kDa subunit family.
 
 0.995
Tpen_0181
PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: tte:TTE1698 Ni,Fe-hydrogenase III small subunit.
 
 0.971
Tpen_1077
NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: pab:PAB2416 putaive NADH dehydrogenase I chain N.
  
 
 0.961
Tpen_1072
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mba:Mbar_A3407 F(420)H(2) dehydrogenase, subunit FpoI.
 
 
 0.955
Tpen_1083
TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: sso:SSO0326 NADH dehydrogenase subunit I.
 
 
 0.911
Tpen_1086
KEGG: ape:APE1415 NADH dehydrogenase I chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I).
 
 
 0.908
Tpen_0187
PFAM: respiratory-chain NADH dehydrogenase, subunit 1; KEGG: mta:Moth_2190 respiratory-chain NADH dehydrogenase, subunit 1.
 
 
 0.904
Tpen_1073
PFAM: respiratory-chain NADH dehydrogenase, subunit 1; KEGG: gsu:GSU0345 NADH dehydrogenase I, H subunit.
 
   
 0.902
Tpen_0182
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mta:Moth_2185 4Fe-4S ferredoxin, iron-sulfur binding.
 
 
 0.855
Tpen_0185
NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: mta:Moth_2188 NADH dehydrogenase (quinone).
 
 
 0.853
Your Current Organism:
Thermofilum pendens
NCBI taxonomy Id: 368408
Other names: T. pendens Hrk 5, Thermofilum pendens Hrk 5, Thermofilum pendens str. Hrk 5, Thermofilum pendens strain Hrk 5
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