STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpen_1072PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mba:Mbar_A3407 F(420)H(2) dehydrogenase, subunit FpoI. (233 aa)    
Predicted Functional Partners:
Tpen_1073
PFAM: respiratory-chain NADH dehydrogenase, subunit 1; KEGG: gsu:GSU0345 NADH dehydrogenase I, H subunit.
  
 0.991
Tpen_1080
PFAM: NADH dehydrogenase (ubiquinone), 30 kDa subunit; KEGG: sai:Saci_2345 NADH dehydrogenase I chain C.
 
 0.991
Tpen_1081
NADH dehydrogenase (ubiquinone); PFAM: NADH-ubiquinone oxidoreductase, chain 49kDa; KEGG: ape:APE1422 NADH dehydrogenase I chain D.
 
 0.991
Tpen_1079
KEGG: sso:SSO0665 NADH dehydrogenase subunit B; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; Belongs to the complex I 20 kDa subunit family.
  
 0.989
Tpen_1078
KEGG: ape:APE1430 putative NADH dehydrogenase I chain A.
  
 0.988
Tpen_1088
NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: ape:APE1410 NADH dehydrogenase I chain N.
  
 0.988
Tpen_1076
KEGG: rxy:Rxyl_1627 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I).
  
 
 0.979
Tpen_1082
PFAM: respiratory-chain NADH dehydrogenase, subunit 1; KEGG: afu:AF1831 F420H2:quinone oxidoreductase, 41.2 kDa subunit, putative.
  
 0.979
Tpen_1084
KEGG: sto:ST2221 hypothetical NADH-plastoquinone oxidoreductase subunit 6.
  
 
 0.975
Tpen_1085
PFAM: NADH-ubiquinone oxidoreductase, chain 4L; KEGG: sru:SRU_1444 NADH dehydrogenase I, K subunit.
  
 
 0.975
Your Current Organism:
Thermofilum pendens
NCBI taxonomy Id: 368408
Other names: T. pendens Hrk 5, Thermofilum pendens Hrk 5, Thermofilum pendens str. Hrk 5, Thermofilum pendens strain Hrk 5
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