STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpen_1198PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: mta:Moth_1348 TrkA. (214 aa)    
Predicted Functional Partners:
Tpen_0314
PFAM: molybdopterin biosynthesis MoaE; KEGG: pai:PAE0727 molybdenum cofactor biosynthesis protein D/E.
  
    0.865
Tpen_1197
PFAM: MscS Mechanosensitive ion channel; KEGG: sfr:Sfri_3521 MscS mechanosensitive ion channel.
     
 0.856
Tpen_1466
PFAM: UspA domain protein; KEGG: sto:ST1524 hypothetical protein.
  
  
 0.587
Tpen_0197
TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; KEGG: mac:MA4082 cation-transporting ATPase.
  
  
 0.559
Tpen_1427
KEGG: lca:LSEI_0125 cation transport ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; plasma-membrane proton-efflux P-type ATPase; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein.
  
  
 0.559
Tpen_1199
TIGRFAM: geranylgeranyl reductase; PFAM: glucose-inhibited division protein A; monooxygenase, FAD-binding; HI0933 family protein; FAD dependent oxidoreductase; Lycopene beta and epsilon cyclase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mta:Moth_0808 geranylgeranyl reductase.
       0.550
Tpen_0494
PFAM: Fmu (Sun) domain protein; PUA domain containing protein; Methyltransferase type 11; KEGG: pab:PAB1173 proliferating-cell nucleolar antigen P120, putative.
  
    0.519
Tpen_0768
PFAM: Fmu (Sun) domain protein; KEGG: pai:PAE3578 sun family protein.
  
    0.519
Tpen_1564
TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; KEGG: hso:HS_1663 possible permease.
  
  
 0.516
Tpen_0040
Glucose-inhibited division protein A; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; FAD dependent oxidoreductase; KEGG: pai:PAE1725 thioredoxin reductase.
  
  
 0.515
Your Current Organism:
Thermofilum pendens
NCBI taxonomy Id: 368408
Other names: T. pendens Hrk 5, Thermofilum pendens Hrk 5, Thermofilum pendens str. Hrk 5, Thermofilum pendens strain Hrk 5
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