STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpen_1330Hypothetical protein. (388 aa)    
Predicted Functional Partners:
Tpen_1328
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfu:PF1090 probable ABC transporter (ATP-binding protein).
       0.773
Tpen_1329
Hypothetical protein.
       0.773
Tpen_1331
Hypothetical protein.
       0.631
Tpen_1332
ABC-2 type transport system permease protein; KEGG: pho:PH0865 322aa long hypothetical protein.
       0.422
Tpen_1333
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pab:PAB1845 putative ABC-2 type transport system ATP-binding protein.
       0.422
Tpen_1334
Membrane protein-like protein; KEGG: pho:PH1368 hypothetical protein.
       0.422
Your Current Organism:
Thermofilum pendens
NCBI taxonomy Id: 368408
Other names: T. pendens Hrk 5, Thermofilum pendens Hrk 5, Thermofilum pendens str. Hrk 5, Thermofilum pendens strain Hrk 5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.