STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpen_1371Hypothetical protein. (270 aa)    
Predicted Functional Partners:
gyaR
Glyoxylate reductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: pab:PAB2374 glycerate dehydrogenase.
    
 0.927
Tpen_1633
SPP-like hydrolase; TIGRFAM: Sucrose-phosphate phosphatase subfamily; HAD-superfamily hydrolase, subfamily IIB; SPP-like hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: ape:APE0766 hypothetical protein.
    
  0.907
Tpen_1575
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: mka:MK0297 predicted dehydrogenase related to phosphoglycerate dehydrogenase.
    
 0.904
Tpen_1372
Alkylglycerone-phosphate synthase; PFAM: FAD linked oxidase domain protein; KEGG: sso:SSO1531 alkyldihydroxyacetonephosphate synthase.
  
  
 0.880
Tpen_1373
PFAM: carbohydrate kinase, FGGY; KEGG: ape:APE0306 glycerol kinase.
  
  
 0.841
Tpen_1375
PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: afu:AF1328 glycerol-3-phosphate dehydrogenase.
  
  
 0.822
Tpen_1374
Hypothetical protein.
       0.783
Tpen_1370
PFAM: PaREP8 domain containing protein; KEGG: sto:ST2578 hypothetical protein.
       0.701
Tpen_1038
KEGG: dvu:DVU2285 L-lactate permease family protein.
  
  
 0.677
Tpen_1376
Competence/damage-inducible protein cinA; PFAM: molybdopterin binding domain; KEGG: pai:PAE0875 competence damage protein, conjectural.
       0.556
Your Current Organism:
Thermofilum pendens
NCBI taxonomy Id: 368408
Other names: T. pendens Hrk 5, Thermofilum pendens Hrk 5, Thermofilum pendens str. Hrk 5, Thermofilum pendens strain Hrk 5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.