STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpen_1426PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mtp:Mthe_0442 ABC transporter related. (254 aa)    
Predicted Functional Partners:
Tpen_1424
PFAM: periplasmic binding protein; KEGG: afu:AF0432 iron (III) transport system substrate-binding protein.
 
 
 0.999
Tpen_1425
PFAM: transport system permease protein; KEGG: tko:TK2019 ABC-type iron(III)-siderophore transport system, permease component.
 
 0.999
Tpen_1248
KEGG: pai:PAE1297 dipeptide transport ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase.
     
0.895
Tpen_1635
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: ape:APE2261 peptide transport system ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase.
     
0.871
Tpen_1423
PFAM: formylmethanofuran dehydrogenase, subunit E region; KEGG: pho:PH1238 hypothetical protein.
 
    0.870
Tpen_1427
KEGG: lca:LSEI_0125 cation transport ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; plasma-membrane proton-efflux P-type ATPase; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein.
  
  
 0.760
Tpen_0905
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ape:APE1892 putative polar amino acid transport system permease protein.
    
 0.679
Tpen_1487
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sfu:Sfum_3497 binding-protein-dependent transport systems inner membrane component.
  
  
 0.587
Tpen_1555
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pmu:PM1455 AfuB homolog.
 
  
 0.587
Tpen_1807
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tko:TK0571 ABC-type iron(III) transport system, permease component.
  
  
 0.587
Your Current Organism:
Thermofilum pendens
NCBI taxonomy Id: 368408
Other names: T. pendens Hrk 5, Thermofilum pendens Hrk 5, Thermofilum pendens str. Hrk 5, Thermofilum pendens strain Hrk 5
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