STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpen_1446PFAM: ABC-2 type transporter; KEGG: pfu:PF1012 probable ABC transporter (ATP-binding protein). (422 aa)    
Predicted Functional Partners:
Tpen_1447
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfu:PF1011 daunorubicin resistance ATP-binding protein drrA.
       0.773
nadE-2
NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.
       0.563
Tpen_1445
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: sto:ST2160 hypothetical glutamine-dependent NAD(+) synthetase.
       0.563
Tpen_1448
Conserved hypothetical protein; KEGG: pai:PAE0531 conserved within P. aerophilum.
       0.514
Your Current Organism:
Thermofilum pendens
NCBI taxonomy Id: 368408
Other names: T. pendens Hrk 5, Thermofilum pendens Hrk 5, Thermofilum pendens str. Hrk 5, Thermofilum pendens strain Hrk 5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.