STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpen_1458Alpha amylase, catalytic region; PFAM: glycoside hydrolase, family 13 domain protein Ig domain protein region domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: pfu:PF1939 neopullulanase (alpha-amylase II). (644 aa)    
Predicted Functional Partners:
Tpen_1778
PFAM: glycosyl transferase, group 1; KEGG: pai:PAE3422 starch phosphorylase.
 
 0.974
Tpen_0791
PFAM: glycoside hydrolase, family 57; KEGG: tko:TK1809 4-alpha-Glucanotransferase, GH57 family.
    
 0.920
Tpen_0135
Alpha-amylase; PFAM: glycoside hydrolase, family 57; KEGG: mtp:Mthe_0255 alpha-amylase.
    
 0.916
Tpen_0210
PFAM: glycoside hydrolase, family 57; KEGG: sai:Saci_1162 membrane bound alpha-amylase.
    
 0.916
Tpen_0806
Uncharacterized protein probably involved in trehalose biosynthesis-like protein; KEGG: ape:APE2310 hypothetical protein.
 
 
 0.860
Tpen_0053
PFAM: amino acid permease-associated region; KEGG: mba:Mbar_A2178 amino acid transporter.
  
 0.853
Tpen_1196
PFAM: amino acid permease-associated region; KEGG: mta:Moth_1345 amino acid permease-associated region.
  
 0.853
Tpen_1513
PFAM: Spore germination protein; amino acid permease-associated region; KEGG: pto:PTO1509 amino acid permease.
  
 0.853
Tpen_1640
PFAM: amino acid permease-associated region; KEGG: mth:MTH546 cationic amino acid transporter related protein.
  
 0.853
Tpen_0792
Starch synthase; PFAM: glycosyl transferase, group 1; Starch synthase catalytic domain protein; KEGG: sai:Saci_1201 glycosyl transferase.
 
  
 0.842
Your Current Organism:
Thermofilum pendens
NCBI taxonomy Id: 368408
Other names: T. pendens Hrk 5, Thermofilum pendens Hrk 5, Thermofilum pendens str. Hrk 5, Thermofilum pendens strain Hrk 5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.