STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpen_1533PFAM: Citrate transporter; KEGG: pai:PAE2457 arsenite transport protein, conjectural. (452 aa)    
Predicted Functional Partners:
Tpen_1534
PFAM: protein of unknown function DUF1393; KEGG: ljo:LJ1703 hypothetical protein.
 
     0.572
Tpen_1535
PFAM: cobalt transport protein; KEGG: sav:SAV2683 conserved hypothetical protein.
 
     0.565
pckG
Phosphoenolpyruvate carboxykinase (GTP); Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle.
       0.538
Tpen_1584
PFAM: ATPase; KEGG: pab:PAB1370 hypothetical protein.
 
     0.475
Tpen_1267
PFAM: ATPase; KEGG: sai:Saci_1080 conserved archaeal protein.
 
     0.445
Tpen_0530
SMART: actin/actin family protein; KEGG: pai:PAE2276 hypothetical protein.
  
     0.421
Your Current Organism:
Thermofilum pendens
NCBI taxonomy Id: 368408
Other names: T. pendens Hrk 5, Thermofilum pendens Hrk 5, Thermofilum pendens str. Hrk 5, Thermofilum pendens strain Hrk 5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.