STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpen_1593TIGRFAM: daunorubicin resistance ABC transporter, inner membrane subunit B; PFAM: ABC-2 type transporter; KEGG: mmp:MMP0165 ABC transporter, family 2. (255 aa)    
Predicted Functional Partners:
Tpen_1594
KEGG: pho:PH0913 ABC-2 type transport system ATP-binding protein; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.951
Tpen_1595
PFAM: transcriptional regulator PadR family protein; KEGG: tko:TK1143 transcription regulator, PadR-like family.
       0.793
Tpen_1560
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ape:APE2579 putative ABC-2 type transport system ATP-binding protein.
  
 0.772
Tpen_1222
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sso:SSO2137 ABC transporter, ATP binding protein.
  
 0.718
Tpen_1400
KEGG: ape:APE2516 putative ABC-2 type transport system ATP-binding protein; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.676
Tpen_1136
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ape:APE1829 putative ABC-2 type transport system ATP-binding protein.
  
 0.631
Tpen_1475
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pai:PAE0315 ABC-2 type transport system ATP-binding protein.
  
 0.614
Tpen_0915
KEGG: pab:PAB1763 hypothetical protein.
  
  
 0.569
Tpen_1652
PFAM: nitroreductase; KEGG: tte:TTE1807 nitroreductase.
  
  
 0.569
Tpen_1447
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfu:PF1011 daunorubicin resistance ATP-binding protein drrA.
  
 0.548
Your Current Organism:
Thermofilum pendens
NCBI taxonomy Id: 368408
Other names: T. pendens Hrk 5, Thermofilum pendens Hrk 5, Thermofilum pendens str. Hrk 5, Thermofilum pendens strain Hrk 5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.