STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpen_1634Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: afu:AF1771 dipeptide transport system ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase. (334 aa)    
Predicted Functional Partners:
Tpen_1636
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tma:TM1153 putative oligopeptide transport system permease protein.
 
 0.987
Tpen_1247
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfu:PF1410 dipeptide transport system permease protein.
 
 0.952
Tpen_1678
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tma:TM1221 putative oligopeptide transport system permease protein.
 
 
 0.936
Tpen_1635
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: ape:APE2261 peptide transport system ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase.
 
   
0.900
Tpen_1637
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tma:TM1149 putative oligopeptide transport system permease protein.
 
  
 0.844
Tpen_1638
PFAM: extracellular solute-binding protein, family 5; KEGG: tma:TM1150 putative oligopeptide transport system substrate-binding protein.
  
 
 0.828
Tpen_0905
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ape:APE1892 putative polar amino acid transport system permease protein.
      0.625
Tpen_0146
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: pai:PAE3317 oligopeptide transport ATP-binding protein, putative; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase.
 
   
0.599
Tpen_1248
KEGG: pai:PAE1297 dipeptide transport ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase.
 
   
0.591
Tpen_1679
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: tma:TM1220 putative oligopeptide transport system ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase.
 
   
0.585
Your Current Organism:
Thermofilum pendens
NCBI taxonomy Id: 368408
Other names: T. pendens Hrk 5, Thermofilum pendens Hrk 5, Thermofilum pendens str. Hrk 5, Thermofilum pendens strain Hrk 5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.