STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpen_1675PFAM: glycoside hydrolase, family 1; KEGG: pfu:PF1208 beta-mannosidase; Belongs to the glycosyl hydrolase 1 family. (513 aa)    
Predicted Functional Partners:
Tpen_1511
Alpha-galactosidase; PFAM: glycoside hydrolase, family 4; KEGG: tma:TM1834 alpha-glucosidase.
 
 
 0.949
Tpen_0901
Glucokinase; PFAM: ROK family protein; KEGG: hal:VNG2629G glucose kinase.
  
 
 0.941
Tpen_1110
PFAM: glycoside hydrolase, family 1; KEGG: pab:PAB1740 beta-mannosidase; Belongs to the glycosyl hydrolase 1 family.
  
  
 
0.903
Tpen_1674
KEGG: tko:TK1762 hypothetical protein.
     
 0.821
Tpen_1673
KEGG: pho:PH0500 hypothetical protein.
     
 0.820
Tpen_1241
TIGRFAM: sugar-phosphate isomerases, RpiB/LacA/LacB family; PFAM: Ribose/galactose isomerase; KEGG: sma:SAV1547 putative ribose-5-phosphate isomerase.
  
  
 0.695
Tpen_1676
PFAM: extracellular solute-binding protein, family 5; KEGG: pfu:PF1209 oligopeptide ABC transporter (oligopeptide-binding protein).
 
   
 0.687
Tpen_1677
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pab:PAB0628 oligopeptide transport system permease protein.
 
     0.590
Tpen_1679
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: tma:TM1220 putative oligopeptide transport system ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase.
       0.493
Tpen_1678
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tma:TM1221 putative oligopeptide transport system permease protein.
       0.472
Your Current Organism:
Thermofilum pendens
NCBI taxonomy Id: 368408
Other names: T. pendens Hrk 5, Thermofilum pendens Hrk 5, Thermofilum pendens str. Hrk 5, Thermofilum pendens strain Hrk 5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.