STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpen_1693PFAM: protein of unknown function DUF86; KEGG: pai:PAE0165 hypothetical protein. (92 aa)    
Predicted Functional Partners:
Tpen_1692
PFAM: DNA polymerase, beta domain protein region; KEGG: pai:PAE0166 paREP11.
   
 
 0.889
Tpen_1697
PFAM: DNA polymerase, beta domain protein region; KEGG: pai:PAE0273 hypothetical protein.
   
 
 0.601
Tpen_1277
PFAM: DNA polymerase, beta domain protein region; KEGG: pai:PAE0166 paREP11.
   
 
 0.525
Tpen_1252
PFAM: DNA polymerase, beta domain protein region; KEGG: pab:PAB1545 hypothetical protein.
   
 
 0.507
Tpen_1422
PFAM: DNA polymerase, beta domain protein region; KEGG: pai:PAE2546 paREP11.
   
 
 0.507
Tpen_1182
Hypothetical protein; KEGG: mta:Moth_0185 DNA polymerase, beta-like region.
   
 
 0.498
Tpen_0991
PFAM: DNA polymerase, beta domain protein region; KEGG: sso:SSO1884 hypothetical protein.
   
 
 0.487
Tpen_1689
PFAM: DNA polymerase, beta domain protein region; KEGG: sso:SSO1884 hypothetical protein.
   
 
 0.487
Tpen_1433
PFAM: DNA polymerase, beta domain protein region; KEGG: sto:ST1142 hypothetical protein.
   
 
 0.483
Tpen_0998
PFAM: DNA polymerase, beta domain protein region; KEGG: sso:SSO2781 hypothetical protein.
   
 
 0.478
Your Current Organism:
Thermofilum pendens
NCBI taxonomy Id: 368408
Other names: T. pendens Hrk 5, Thermofilum pendens Hrk 5, Thermofilum pendens str. Hrk 5, Thermofilum pendens strain Hrk 5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.