STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpen_1778PFAM: glycosyl transferase, group 1; KEGG: pai:PAE3422 starch phosphorylase. (516 aa)    
Predicted Functional Partners:
Tpen_0792
Starch synthase; PFAM: glycosyl transferase, group 1; Starch synthase catalytic domain protein; KEGG: sai:Saci_1201 glycosyl transferase.
 
  
 0.993
Tpen_1458
Alpha amylase, catalytic region; PFAM: glycoside hydrolase, family 13 domain protein Ig domain protein region domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: pfu:PF1939 neopullulanase (alpha-amylase II).
 
 0.974
Tpen_0135
Alpha-amylase; PFAM: glycoside hydrolase, family 57; KEGG: mtp:Mthe_0255 alpha-amylase.
 
 
 0.961
Tpen_0407
KEGG: tko:TK0871 ornithine carbamoyltransferase; TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
  
  
 0.960
Tpen_0210
PFAM: glycoside hydrolase, family 57; KEGG: sai:Saci_1162 membrane bound alpha-amylase.
 
 
 0.948
Tpen_1720
UDP-glucose pyrophosphorylase; PFAM: Nucleotidyl transferase; KEGG: sto:ST2352 hypothetical glucose-1-phosphate thymidylyltransferase.
    
 0.926
Tpen_1829
UDP-glucose pyrophosphorylase; PFAM: Nucleotidyl transferase; KEGG: sso:SSO0813 UTP-glucose-1-phosphate uridylyltransferase.
    
 0.926
Tpen_0791
PFAM: glycoside hydrolase, family 57; KEGG: tko:TK1809 4-alpha-Glucanotransferase, GH57 family.
  
 
 0.924
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
  
 
 0.897
Tpen_0660
TIGRFAM: bifunctional phosphoglucose/phosphomannose isomerase; PFAM: sugar isomerase (SIS); KEGG: swo:Swol_0260 bifunctional phosphoglucose/phosphomannose isomerase.
  
  
 0.886
Your Current Organism:
Thermofilum pendens
NCBI taxonomy Id: 368408
Other names: T. pendens Hrk 5, Thermofilum pendens Hrk 5, Thermofilum pendens str. Hrk 5, Thermofilum pendens strain Hrk 5
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