STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpen_1828Hypothetical protein. (442 aa)    
Predicted Functional Partners:
Tpen_1827
Hypothetical protein.
       0.815
Tpen_1826
Glycosyltransferases probably involved in cell wall biogenesis-like protein; KEGG: sai:Saci_1499 conserved membrane glocosyltransferase.
       0.773
Tpen_1829
UDP-glucose pyrophosphorylase; PFAM: Nucleotidyl transferase; KEGG: sso:SSO0813 UTP-glucose-1-phosphate uridylyltransferase.
       0.746
Tpen_1830
PFAM: Desulfoferrodoxin, ferrous iron-binding region; KEGG: tte:TTE2229 putative superoxide reductase.
       0.523
Tpen_1831
PFAM: major facilitator superfamily MFS_1; KEGG: tte:TTE2458 Na+/melibiose symporter and related transporters.
       0.455
Tpen_1832
PFAM: protein of unknown function DUF6, transmembrane; KEGG: pho:PH0613 hypothetical protein.
       0.455
Your Current Organism:
Thermofilum pendens
NCBI taxonomy Id: 368408
Other names: T. pendens Hrk 5, Thermofilum pendens Hrk 5, Thermofilum pendens str. Hrk 5, Thermofilum pendens strain Hrk 5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.