STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ73915.1Transcriptional regulator, LacI family. (344 aa)    
Predicted Functional Partners:
SFJ60247.1
PTS system, D-glucosamine-specific IIC component.
    
 0.862
SFJ73946.1
Raffinose/stachyose/melibiose transport system permease protein.
 
   
 0.808
SFJ73957.1
Raffinose/stachyose/melibiose transport system permease protein.
 
   
 0.803
SFJ73901.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.767
SFI97770.1
Phosphocarrier protein.
   
 
 0.719
SFJ08116.1
PTS system maltose-specific IIB component, Glc family /PTS system maltose-specific IIC component, Glc family.
    
 0.701
SFJ73971.1
Raffinose/stachyose/melibiose transport system substrate-binding protein.
 
   
 0.679
SFJ73932.1
4-alpha-glucanotransferase.
    
 0.676
SFJ73889.1
Uncharacterized membrane protein YesL.
 
     0.600
SFJ48221.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
 
  
 0.478
Your Current Organism:
Terrisporobacter glycolicus
NCBI taxonomy Id: 36841
Other names: ATCC 14880, BCRC 14553, Clostridium glycolicum, Clostridium glycolinum, NCIMB 10632, NCTC 13026, T. glycolicus
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