STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI92086.1GDSL-like Lipase/Acylhydrolase. (248 aa)    
Predicted Functional Partners:
SFI92106.1
Protein of unknown function.
 
     0.947
SFI92144.1
DHHW protein.
 
    0.918
SFJ17796.1
Hypothetical protein.
   
 0.852
SFJ53979.1
Hypothetical protein.
   
 0.852
SFJ26068.1
Hypothetical protein.
 
   0.827
SFI92126.1
Alginate O-acetyltransferase complex protein AlgI; Non-canonical start codon; manually curated; Belongs to the membrane-bound acyltransferase family.
 
    0.800
SFJ33193.1
Hypothetical protein.
  
   0.733
SFJ12152.1
F5/8 type C domain-containing protein.
  
  
 0.660
SFI92378.1
Pseudaminic acid synthase.
    
 0.636
SFJ48221.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
    
 0.636
Your Current Organism:
Terrisporobacter glycolicus
NCBI taxonomy Id: 36841
Other names: ATCC 14880, BCRC 14553, Clostridium glycolicum, Clostridium glycolinum, NCIMB 10632, NCTC 13026, T. glycolicus
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