STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI92927.1ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. (258 aa)    
Predicted Functional Partners:
SFI92909.1
ABC-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein.
 
 0.994
SFI92887.1
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
 0.990
SFI92945.1
Uncharacterized protein, MTH1187 family.
 
    0.943
SFJ66043.1
NitT/TauT family transport system ATP-binding protein.
 
 0.937
SFJ17359.1
NitT/TauT family transport system ATP-binding protein.
 
 0.916
SFJ16245.1
NitT/TauT family transport system substrate-binding protein.
  
 
 0.828
SFI92867.1
TatD DNase family protein.
       0.781
SFJ17203.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.745
SFJ50075.1
Osmoprotectant transport system ATP-binding protein.
     0.514
SFJ17183.1
Formate dehydrogenase major subunit.
    
 0.479
Your Current Organism:
Terrisporobacter glycolicus
NCBI taxonomy Id: 36841
Other names: ATCC 14880, BCRC 14553, Clostridium glycolicum, Clostridium glycolinum, NCIMB 10632, NCTC 13026, T. glycolicus
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