STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI93650.12-oxoglutarate ferredoxin oxidoreductase subunit gamma. (181 aa)    
Predicted Functional Partners:
SFI93627.1
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
 0.999
SFJ74195.1
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
 0.998
SFJ37632.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.998
SFI93618.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
 
 0.988
SFI93592.1
2-oxoglutarate ferredoxin oxidoreductase subunit delta.
 
  
  0.969
SFJ74213.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
 
 0.959
SFJ74223.1
2-oxoglutarate ferredoxin oxidoreductase subunit delta.
 
 
  0.927
SFI93577.1
Hypothetical protein.
 
     0.893
rnfB
Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 0.826
SFJ61889.1
CO-methylating acetyl-CoA synthase precursor.
   
 
 0.781
Your Current Organism:
Terrisporobacter glycolicus
NCBI taxonomy Id: 36841
Other names: ATCC 14880, BCRC 14553, Clostridium glycolicum, Clostridium glycolinum, NCIMB 10632, NCTC 13026, T. glycolicus
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