STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI99165.1Protein of unknown function. (529 aa)    
Predicted Functional Partners:
SFI99191.1
Hypothetical protein.
     0.985
SFI99252.1
Energy-coupling factor transport system permease protein.
 
    0.855
SFI99304.1
Energy-coupling factor transport system substrate-specific component.
 
     0.851
SFI99273.1
Energy-coupling factor transport system ATP-binding protein.
 
     0.849
SFJ31744.1
Protein of unknown function.
  
     0.749
SFJ38200.1
Hypothetical protein.
  
 
  0.694
cinA
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
     
 0.664
SFJ66443.1
Hypothetical protein.
 
  
 0.656
SFI99229.1
Protein of unknown function.
  
0.633
SFJ38506.1
Acyltransferase family protein.
  
    0.623
Your Current Organism:
Terrisporobacter glycolicus
NCBI taxonomy Id: 36841
Other names: ATCC 14880, BCRC 14553, Clostridium glycolicum, Clostridium glycolinum, NCIMB 10632, NCTC 13026, T. glycolicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.