STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ04016.1ABC-2 type transport system ATP-binding protein. (241 aa)    
Predicted Functional Partners:
SFJ04038.1
ABC-2 type transport system permease protein.
 
 
 0.964
SFJ04212.1
Putative ABC transport system ATP-binding protein.
 
    
0.908
SFJ08976.1
Osmoprotectant transport system ATP-binding protein.
 
    
0.907
SFJ04061.1
DNA-binding transcriptional regulator, MerR family.
 
     0.869
SFJ52138.1
Putative ABC transport system ATP-binding protein.
 
    
0.821
SFJ67351.1
Putative ABC transport system ATP-binding protein.
 
    
0.798
SFJ08821.1
Putative ABC transport system ATP-binding protein.
 
    
0.720
SFJ66991.1
Putative ABC transport system ATP-binding protein.
 
    
0.649
SFJ73901.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
   
 
0.631
SFJ66043.1
NitT/TauT family transport system ATP-binding protein.
 
    
0.511
Your Current Organism:
Terrisporobacter glycolicus
NCBI taxonomy Id: 36841
Other names: ATCC 14880, BCRC 14553, Clostridium glycolicum, Clostridium glycolinum, NCIMB 10632, NCTC 13026, T. glycolicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.