STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ04767.1Protein of unknown function; Belongs to the UPF0473 family. (89 aa)    
Predicted Functional Partners:
SFJ04749.1
Putative holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
  
    0.894
SFJ04679.1
Uncharacterized protein, UPF0297 family; Belongs to the UPF0297 family.
 
  
 0.811
SFJ03200.1
Hypothetical protein.
  
     0.667
SFJ04813.1
Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family.
  
    0.590
SFJ06960.1
Uncharacterized membrane protein YvlD, DUF360 family.
  
     0.571
SFJ04724.1
Hypothetical protein.
 
     0.570
SFJ04790.1
Transcriptional attenuator, LytR family.
       0.497
SFJ62429.1
Putative sporulation protein YtxC.
  
     0.484
SFJ04705.1
Hypothetical protein.
 
     0.479
SFJ55163.1
CopG family transcriptional regulator / antitoxin EndoAI.
  
     0.472
Your Current Organism:
Terrisporobacter glycolicus
NCBI taxonomy Id: 36841
Other names: ATCC 14880, BCRC 14553, Clostridium glycolicum, Clostridium glycolinum, NCIMB 10632, NCTC 13026, T. glycolicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.