STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ07614.1Membrane protease YdiL, CAAX protease family. (329 aa)    
Predicted Functional Partners:
SFJ71263.1
Hypothetical protein.
  
     0.711
SFJ03888.1
Putative ABC transport system permease protein.
  
     0.709
SFJ29411.1
5-bromo-4-chloroindolyl phosphate hydrolysis protein.
  
     0.687
SFJ67076.1
Conserved repeat domain-containing protein/fimbrial isopeptide formation D2 domain-containing protein.
  
     0.632
SFJ07508.1
Hypothetical protein.
 
     0.592
SFJ52839.1
Putative ABC transport system permease protein.
  
     0.587
SFJ22664.1
Peptidase family S41.
  
     0.573
SFJ04186.1
Signal transduction histidine kinase.
  
     0.528
SFJ26153.1
Bacteriophage Gp15 protein.
  
     0.525
SFJ50207.1
Uncharacterized membrane protein.
  
     0.520
Your Current Organism:
Terrisporobacter glycolicus
NCBI taxonomy Id: 36841
Other names: ATCC 14880, BCRC 14553, Clostridium glycolicum, Clostridium glycolinum, NCIMB 10632, NCTC 13026, T. glycolicus
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