STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ08256.1Transcriptional regulator, RpiR family. (257 aa)    
Predicted Functional Partners:
SFJ60247.1
PTS system, D-glucosamine-specific IIC component.
 
 
 0.961
SFJ08116.1
PTS system maltose-specific IIB component, Glc family /PTS system maltose-specific IIC component, Glc family.
 
 
 0.943
SFJ08189.1
Maltose-6'-phosphate glucosidase.
 
 
 0.896
SFJ37632.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.829
SFJ08233.1
Transcriptional regulator, RpiR family.
 
    
0.796
SFJ08212.1
PTS system, glucose-specific IIA component.
 
 
 0.699
SFJ34178.1
6-phospho-beta-glucosidase.
 
 
 0.606
SFJ66105.1
Lichenan operon transcriptional antiterminator.
  
   
 0.428
SFJ22725.1
ROK family protein.
 
 
 0.404
SFJ08274.1
Fibronectin type III domain-containing protein.
       0.403
Your Current Organism:
Terrisporobacter glycolicus
NCBI taxonomy Id: 36841
Other names: ATCC 14880, BCRC 14553, Clostridium glycolicum, Clostridium glycolinum, NCIMB 10632, NCTC 13026, T. glycolicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.