STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ10868.1Hypothetical protein. (144 aa)    
Predicted Functional Partners:
SFJ10845.1
Nucleotidyltransferase domain-containing protein.
       0.773
SFJ10890.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
       0.542
SFJ10930.1
Type I restriction enzyme, S subunit.
       0.542
SFJ10792.1
Type I restriction enzyme M protein.
       0.527
SFJ10809.1
Type I restriction modification DNA specificity domain-containing protein.
       0.527
SFJ10951.1
Hypothetical protein.
       0.418
SFJ10969.1
Addiction module antidote protein, HigA family.
       0.418
Your Current Organism:
Terrisporobacter glycolicus
NCBI taxonomy Id: 36841
Other names: ATCC 14880, BCRC 14553, Clostridium glycolicum, Clostridium glycolinum, NCIMB 10632, NCTC 13026, T. glycolicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.