STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ20003.1BlaI family transcriptional regulator, penicillinase repressor. (121 aa)    
Predicted Functional Partners:
SFJ19990.1
Bla regulator protein blaR1.
 
 
 0.979
SFI98646.1
Bla regulator protein blaR1.
 
 
 0.953
SFJ11408.1
Cd2+/Zn2+-exporting ATPase.
  
  
 0.706
SFJ23093.1
Copper chaperone CopZ.
  
  
 0.680
SFJ08380.1
Beta-lactamase class D.
    
 0.677
SFI97995.1
Sulfite exporter TauE/SafE.
  
  
 0.669
SFJ20025.1
Hypothetical protein.
       0.461
SFJ49854.1
MutS domain III; Belongs to the DNA mismatch repair MutS family.
  
     0.435
SFJ20045.1
Hypothetical protein.
       0.428
Your Current Organism:
Terrisporobacter glycolicus
NCBI taxonomy Id: 36841
Other names: ATCC 14880, BCRC 14553, Clostridium glycolicum, Clostridium glycolinum, NCIMB 10632, NCTC 13026, T. glycolicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.