STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ26068.1Hypothetical protein. (1665 aa)    
Predicted Functional Partners:
SFJ26090.1
Putative phage tail component, N-terminal domain-containing protein.
  
   0.882
SFJ26111.1
Phage-related protein.
 
  
 0.874
SFI92086.1
GDSL-like Lipase/Acylhydrolase.
 
   0.827
SFJ26047.1
Hypothetical protein.
       0.773
SFJ26032.1
Hypothetical protein.
       0.689
SFJ17979.1
Phage tail tape measure protein, TP901 family, core region.
 
 
 0.675
SFJ33226.1
Hypothetical protein.
 
 
 0.662
SFJ26153.1
Bacteriophage Gp15 protein.
 
    0.583
SFJ67076.1
Conserved repeat domain-containing protein/fimbrial isopeptide formation D2 domain-containing protein.
 
 
   0.548
SFI95200.1
Putative phage tail component, N-terminal domain-containing protein.
  
   0.531
Your Current Organism:
Terrisporobacter glycolicus
NCBI taxonomy Id: 36841
Other names: ATCC 14880, BCRC 14553, Clostridium glycolicum, Clostridium glycolinum, NCIMB 10632, NCTC 13026, T. glycolicus
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