Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFJ37262.1 | SFJ37331.1 | SAMN02910355_2498 | SAMN02910355_2502 | Flagellar hook-associated protein 2 N-terminus; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar hook-associated protein 3 FlgL. | 0.990 |
| SFJ37262.1 | SFJ37362.1 | SAMN02910355_2498 | SAMN02910355_2504 | Flagellar hook-associated protein 2 N-terminus; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | FlgN protein. | 0.722 |
| SFJ37262.1 | SFJ37398.1 | SAMN02910355_2498 | SAMN02910355_2506 | Flagellar hook-associated protein 2 N-terminus; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar motor switch protein FliN/FliY. | 0.966 |
| SFJ37262.1 | SFJ37413.1 | SAMN02910355_2498 | SAMN02910355_2507 | Flagellar hook-associated protein 2 N-terminus; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Hypothetical protein. | 0.887 |
| SFJ37262.1 | SFJ37431.1 | SAMN02910355_2498 | SAMN02910355_2508 | Flagellar hook-associated protein 2 N-terminus; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Transglycosylase SLT domain-containing protein. | 0.857 |
| SFJ37262.1 | csrA | SAMN02910355_2498 | SAMN02910355_2500 | Flagellar hook-associated protein 2 N-terminus; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.924 |
| SFJ37262.1 | flgK | SAMN02910355_2498 | SAMN02910355_2503 | Flagellar hook-associated protein 2 N-terminus; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar hook-associated protein 1 FlgK. | 0.990 |
| SFJ37262.1 | flgM | SAMN02910355_2498 | SAMN02910355_2505 | Flagellar hook-associated protein 2 N-terminus; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Anti-sigma-28 factor, FlgM family. | 0.946 |
| SFJ37262.1 | fliS | SAMN02910355_2498 | SAMN02910355_2499 | Flagellar hook-associated protein 2 N-terminus; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar protein FliS. | 0.994 |
| SFJ37262.1 | fliW | SAMN02910355_2498 | SAMN02910355_2501 | Flagellar hook-associated protein 2 N-terminus; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.984 |
| SFJ37331.1 | SFJ37262.1 | SAMN02910355_2502 | SAMN02910355_2498 | Flagellar hook-associated protein 3 FlgL. | Flagellar hook-associated protein 2 N-terminus; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.990 |
| SFJ37331.1 | SFJ37362.1 | SAMN02910355_2502 | SAMN02910355_2504 | Flagellar hook-associated protein 3 FlgL. | FlgN protein. | 0.946 |
| SFJ37331.1 | SFJ37398.1 | SAMN02910355_2502 | SAMN02910355_2506 | Flagellar hook-associated protein 3 FlgL. | Flagellar motor switch protein FliN/FliY. | 0.956 |
| SFJ37331.1 | SFJ37413.1 | SAMN02910355_2502 | SAMN02910355_2507 | Flagellar hook-associated protein 3 FlgL. | Hypothetical protein. | 0.811 |
| SFJ37331.1 | SFJ37431.1 | SAMN02910355_2502 | SAMN02910355_2508 | Flagellar hook-associated protein 3 FlgL. | Transglycosylase SLT domain-containing protein. | 0.896 |
| SFJ37331.1 | csrA | SAMN02910355_2502 | SAMN02910355_2500 | Flagellar hook-associated protein 3 FlgL. | Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.903 |
| SFJ37331.1 | flgK | SAMN02910355_2502 | SAMN02910355_2503 | Flagellar hook-associated protein 3 FlgL. | Flagellar hook-associated protein 1 FlgK. | 0.996 |
| SFJ37331.1 | flgM | SAMN02910355_2502 | SAMN02910355_2505 | Flagellar hook-associated protein 3 FlgL. | Anti-sigma-28 factor, FlgM family. | 0.924 |
| SFJ37331.1 | fliS | SAMN02910355_2502 | SAMN02910355_2499 | Flagellar hook-associated protein 3 FlgL. | Flagellar protein FliS. | 0.998 |
| SFJ37331.1 | fliW | SAMN02910355_2502 | SAMN02910355_2501 | Flagellar hook-associated protein 3 FlgL. | Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.992 |
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