Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFJ00606.1 | SFJ39047.1 | SAMN02910355_0555 | SAMN02910355_2612 | Protein-tyrosine phosphatase. | Capsular exopolysaccharide family. | 0.934 |
SFJ00606.1 | SFJ39790.1 | SAMN02910355_0555 | SAMN02910355_2656 | Protein-tyrosine phosphatase. | O-antigen biosynthesis protein WbqP. | 0.436 |
SFJ00606.1 | SFJ39824.1 | SAMN02910355_0555 | SAMN02910355_2658 | Protein-tyrosine phosphatase. | Capsular exopolysaccharide family. | 0.899 |
SFJ00606.1 | SFJ39849.1 | SAMN02910355_0555 | SAMN02910355_2659 | Protein-tyrosine phosphatase. | Capsular polysaccharide biosynthesis protein. | 0.869 |
SFJ38200.1 | SFJ39572.1 | SAMN02910355_2556 | SAMN02910355_2644 | Hypothetical protein. | Membrane protein involved in the export of O-antigen and teichoic acid. | 0.514 |
SFJ38200.1 | SFJ39718.1 | SAMN02910355_2556 | SAMN02910355_2652 | Hypothetical protein. | EpsG family protein. | 0.770 |
SFJ38200.1 | SFJ39849.1 | SAMN02910355_2556 | SAMN02910355_2659 | Hypothetical protein. | Capsular polysaccharide biosynthesis protein. | 0.664 |
SFJ39047.1 | SFJ00606.1 | SAMN02910355_2612 | SAMN02910355_0555 | Capsular exopolysaccharide family. | Protein-tyrosine phosphatase. | 0.934 |
SFJ39047.1 | SFJ39790.1 | SAMN02910355_2612 | SAMN02910355_2656 | Capsular exopolysaccharide family. | O-antigen biosynthesis protein WbqP. | 0.699 |
SFJ39047.1 | SFJ39806.1 | SAMN02910355_2612 | SAMN02910355_2657 | Capsular exopolysaccharide family. | NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC. | 0.514 |
SFJ39047.1 | SFJ39849.1 | SAMN02910355_2612 | SAMN02910355_2659 | Capsular exopolysaccharide family. | Capsular polysaccharide biosynthesis protein. | 0.759 |
SFJ39572.1 | SFJ38200.1 | SAMN02910355_2644 | SAMN02910355_2556 | Membrane protein involved in the export of O-antigen and teichoic acid. | Hypothetical protein. | 0.514 |
SFJ39572.1 | SFJ39718.1 | SAMN02910355_2644 | SAMN02910355_2652 | Membrane protein involved in the export of O-antigen and teichoic acid. | EpsG family protein. | 0.911 |
SFJ39572.1 | SFJ39750.1 | SAMN02910355_2644 | SAMN02910355_2654 | Membrane protein involved in the export of O-antigen and teichoic acid. | Glycosyltransferase involved in cell wall bisynthesis. | 0.910 |
SFJ39572.1 | SFJ39790.1 | SAMN02910355_2644 | SAMN02910355_2656 | Membrane protein involved in the export of O-antigen and teichoic acid. | O-antigen biosynthesis protein WbqP. | 0.781 |
SFJ39572.1 | SFJ39806.1 | SAMN02910355_2644 | SAMN02910355_2657 | Membrane protein involved in the export of O-antigen and teichoic acid. | NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC. | 0.756 |
SFJ39572.1 | SFJ39824.1 | SAMN02910355_2644 | SAMN02910355_2658 | Membrane protein involved in the export of O-antigen and teichoic acid. | Capsular exopolysaccharide family. | 0.511 |
SFJ39572.1 | SFJ39849.1 | SAMN02910355_2644 | SAMN02910355_2659 | Membrane protein involved in the export of O-antigen and teichoic acid. | Capsular polysaccharide biosynthesis protein. | 0.728 |
SFJ39718.1 | SFJ38200.1 | SAMN02910355_2652 | SAMN02910355_2556 | EpsG family protein. | Hypothetical protein. | 0.770 |
SFJ39718.1 | SFJ39572.1 | SAMN02910355_2652 | SAMN02910355_2644 | EpsG family protein. | Membrane protein involved in the export of O-antigen and teichoic acid. | 0.911 |
page 1 of 4