STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ39849.1Capsular polysaccharide biosynthesis protein. (253 aa)    
Predicted Functional Partners:
SFJ39824.1
Capsular exopolysaccharide family.
 
 
 0.943
SFJ39718.1
EpsG family protein.
 
  
 0.883
SFJ00606.1
Protein-tyrosine phosphatase.
 
 
 0.869
SFJ39863.1
WYL domain-containing protein.
       0.773
SFJ39806.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
 
  
 0.769
SFJ39047.1
Capsular exopolysaccharide family.
 
 
 0.759
SFJ39790.1
O-antigen biosynthesis protein WbqP.
  
  
 0.737
SFJ39572.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
  
 0.728
SFJ39750.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
 0.701
SFJ38200.1
Hypothetical protein.
  
     0.664
Your Current Organism:
Terrisporobacter glycolicus
NCBI taxonomy Id: 36841
Other names: ATCC 14880, BCRC 14553, Clostridium glycolicum, Clostridium glycolinum, NCIMB 10632, NCTC 13026, T. glycolicus
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