Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFJ10467.1 | SFJ16748.1 | SAMN02910355_1032 | SAMN02910355_1330 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | 0.941 |
SFJ10467.1 | SFJ17183.1 | SAMN02910355_1032 | SAMN02910355_1352 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Formate dehydrogenase major subunit. | 0.467 |
SFJ10467.1 | SFJ38374.1 | SAMN02910355_1032 | SAMN02910355_2569 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | CoA-disulfide reductase. | 0.931 |
SFJ10467.1 | SFJ47979.1 | SAMN02910355_1032 | SAMN02910355_2675 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | 0.941 |
SFJ11693.1 | SFJ16748.1 | SAMN02910355_1094 | SAMN02910355_1330 | Cysteine desulfurase family protein. | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | 0.980 |
SFJ11693.1 | SFJ17183.1 | SAMN02910355_1094 | SAMN02910355_1352 | Cysteine desulfurase family protein. | Formate dehydrogenase major subunit. | 0.871 |
SFJ11693.1 | SFJ38374.1 | SAMN02910355_1094 | SAMN02910355_2569 | Cysteine desulfurase family protein. | CoA-disulfide reductase. | 0.705 |
SFJ11693.1 | SFJ47979.1 | SAMN02910355_1094 | SAMN02910355_2675 | Cysteine desulfurase family protein. | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | 0.980 |
SFJ16748.1 | SFJ10467.1 | SAMN02910355_1330 | SAMN02910355_1032 | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.941 |
SFJ16748.1 | SFJ11693.1 | SAMN02910355_1330 | SAMN02910355_1094 | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | Cysteine desulfurase family protein. | 0.980 |
SFJ16748.1 | SFJ17183.1 | SAMN02910355_1330 | SAMN02910355_1352 | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | Formate dehydrogenase major subunit. | 0.983 |
SFJ16748.1 | SFJ36353.1 | SAMN02910355_1330 | SAMN02910355_2440 | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | Fe-S oxidoreductase. | 0.948 |
SFJ16748.1 | SFJ38374.1 | SAMN02910355_1330 | SAMN02910355_2569 | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | CoA-disulfide reductase. | 0.955 |
SFJ16748.1 | SFJ47979.1 | SAMN02910355_1330 | SAMN02910355_2675 | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | 0.998 |
SFJ16748.1 | SFJ54760.1 | SAMN02910355_1330 | SAMN02910355_3098 | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | Glyoxylase, beta-lactamase superfamily II. | 0.955 |
SFJ16748.1 | SFJ60660.1 | SAMN02910355_1330 | SAMN02910355_3310 | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | Glyoxylase, beta-lactamase superfamily II. | 0.955 |
SFJ16748.1 | SFJ61598.1 | SAMN02910355_1330 | SAMN02910355_3372 | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | Cysteine desulfurase. | 0.980 |
SFJ16748.1 | iscS | SAMN02910355_1330 | SAMN02910355_0752 | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily. | 0.980 |
SFJ17183.1 | SFJ10467.1 | SAMN02910355_1352 | SAMN02910355_1032 | Formate dehydrogenase major subunit. | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.467 |
SFJ17183.1 | SFJ11693.1 | SAMN02910355_1352 | SAMN02910355_1094 | Formate dehydrogenase major subunit. | Cysteine desulfurase family protein. | 0.871 |
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