STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ49489.1methylmalonyl-CoA mutase, N-terminal domain. (554 aa)    
Predicted Functional Partners:
SFJ49473.1
methylmalonyl-CoA mutase, C-terminal domain.
 0.999
SFJ49455.1
LAO/AO transport system kinase.
  
 0.995
mce
methylmalonyl-CoA epimerase.
 
  
 0.981
glmS
Glutamate mutase subunit S; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).
 
 0.942
SFJ37632.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.933
SFJ49501.1
succinyl-CoA:acetate CoA-transferase.
    
 0.908
SFJ49423.1
methylmalonyl-CoA decarboxylase alpha subunit.
 
   
 0.876
SFJ72907.1
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
    
 0.828
SFJ13060.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
   
 
 0.780
SFJ49394.1
Biotin-requiring enzyme.
  
 
 0.737
Your Current Organism:
Terrisporobacter glycolicus
NCBI taxonomy Id: 36841
Other names: ATCC 14880, BCRC 14553, Clostridium glycolicum, Clostridium glycolinum, NCIMB 10632, NCTC 13026, T. glycolicus
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