STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ51813.1Hypothetical protein. (169 aa)    
Predicted Functional Partners:
SFJ51830.1
Hypothetical protein.
      0.839
SFJ22136.1
AAA+-type ATPase, SpoVK/Ycf46/Vps4 family.
   
 0.760
SFJ03059.1
Signal transduction histidine kinase.
    
 0.495
SFJ50858.1
PAS domain S-box-containing protein.
    
 0.495
SFJ59483.1
PAS domain S-box-containing protein.
    
 0.495
SFJ61192.1
TPR repeat-containing protein.
   
 0.490
SFJ51846.1
Transposase zinc-binding domain-containing protein.
       0.430
SFJ51795.1
YD repeat-containing protein; Non-canonical start codon; manually curated.
  
    0.428
SFJ51782.1
Intein C-terminal splicing region/intein N-terminal splicing region/RHS repeat-associated core domain-containing protein.
  
    0.416
Your Current Organism:
Terrisporobacter glycolicus
NCBI taxonomy Id: 36841
Other names: ATCC 14880, BCRC 14553, Clostridium glycolicum, Clostridium glycolinum, NCIMB 10632, NCTC 13026, T. glycolicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.