STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ53719.1Hypothetical protein. (358 aa)    
Predicted Functional Partners:
SFJ68942.1
MazG-like family protein.
  
     0.556
SFJ02233.1
Sporulation integral membrane protein YlbJ.
  
     0.550
SFI97160.1
Similar to stage IV sporulation protein.
  
     0.546
SFI96795.1
Stage II sporulation protein P.
  
     0.505
SFJ01110.1
Hypothetical protein.
  
     0.502
SFJ69754.1
Stage II sporulation protein R.
  
     0.498
SFJ00972.1
Sporulation protein, YlmC/YmxH family.
  
     0.490
SFJ53704.1
Type IV pilus assembly protein PilB.
       0.487
SFJ53686.1
Type IV pilus assembly protein PilC.
       0.481
SFJ02513.1
Stage III sporulation protein AH.
  
     0.477
Your Current Organism:
Terrisporobacter glycolicus
NCBI taxonomy Id: 36841
Other names: ATCC 14880, BCRC 14553, Clostridium glycolicum, Clostridium glycolinum, NCIMB 10632, NCTC 13026, T. glycolicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.