Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFJ02064.1 | SFJ37632.1 | SAMN02910355_0625 | SAMN02910355_2520 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.862 |
SFJ02064.1 | SFJ55114.1 | SAMN02910355_0625 | SAMN02910355_3119 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Transketolase. | 0.891 |
SFJ02064.1 | SFJ55128.1 | SAMN02910355_0625 | SAMN02910355_3120 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Transketolase. | 0.994 |
SFJ02064.1 | SFJ60247.1 | SAMN02910355_0625 | SAMN02910355_3285 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | PTS system, D-glucosamine-specific IIC component. | 0.649 |
SFJ02064.1 | SFJ69312.1 | SAMN02910355_0625 | SAMN02910355_3726 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Transketolase. | 0.986 |
SFJ02064.1 | pfkA | SAMN02910355_0625 | SAMN02910355_3073 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.699 |
SFJ02064.1 | pgi | SAMN02910355_0625 | SAMN02910355_3031 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.803 |
SFJ02064.1 | prs | SAMN02910355_0625 | SAMN02910355_3163 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.791 |
SFJ02064.1 | rpiB | SAMN02910355_0625 | SAMN02910355_3136 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Ribose 5-phosphate isomerase B. | 0.948 |
SFJ02064.1 | tpiA | SAMN02910355_0625 | SAMN02910355_2961 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.841 |
SFJ37632.1 | SFJ02064.1 | SAMN02910355_2520 | SAMN02910355_0625 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.862 |
SFJ37632.1 | SFJ55114.1 | SAMN02910355_2520 | SAMN02910355_3119 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Transketolase. | 0.856 |
SFJ37632.1 | SFJ55128.1 | SAMN02910355_2520 | SAMN02910355_3120 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Transketolase. | 0.859 |
SFJ37632.1 | SFJ60247.1 | SAMN02910355_2520 | SAMN02910355_3285 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | PTS system, D-glucosamine-specific IIC component. | 0.618 |
SFJ37632.1 | SFJ69312.1 | SAMN02910355_2520 | SAMN02910355_3726 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Transketolase. | 0.859 |
SFJ37632.1 | pfkA | SAMN02910355_2520 | SAMN02910355_3073 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.761 |
SFJ37632.1 | pgi | SAMN02910355_2520 | SAMN02910355_3031 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.957 |
SFJ37632.1 | prs | SAMN02910355_2520 | SAMN02910355_3163 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.576 |
SFJ37632.1 | rpiB | SAMN02910355_2520 | SAMN02910355_3136 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Ribose 5-phosphate isomerase B. | 0.888 |
SFJ37632.1 | tpiA | SAMN02910355_2520 | SAMN02910355_2961 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.785 |
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