STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ59415.1Indolepyruvate ferredoxin oxidoreductase alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. (594 aa)    
Predicted Functional Partners:
SFJ59398.1
Indolepyruvate ferredoxin oxidoreductase beta subunit.
 0.993
SFJ37632.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.974
SFJ63016.1
NADH-quinone oxidoreductase subunit F.
    
 0.914
SFJ17167.1
NADH-quinone oxidoreductase subunit F.
    
 0.896
SFJ17183.1
Formate dehydrogenase major subunit.
   
 0.831
SFJ36365.1
Aldehyde oxidoreductase.
    
  0.775
SFJ24062.1
NADPH-dependent glutamate synthase beta chain.
   
 0.741
SFJ63036.1
NADH-quinone oxidoreductase subunit G.
    
 0.735
SFJ54499.1
Ferredoxin hydrogenase.
  
 
 0.715
moaC
Cyclic pyranopterin phosphate synthase; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
   
    0.713
Your Current Organism:
Terrisporobacter glycolicus
NCBI taxonomy Id: 36841
Other names: ATCC 14880, BCRC 14553, Clostridium glycolicum, Clostridium glycolinum, NCIMB 10632, NCTC 13026, T. glycolicus
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