STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ66304.1Citrate lyase beta subunit. (356 aa)    
Predicted Functional Partners:
SFJ66319.1
TRSP domain C terminus to PRTase_2.
   
 0.977
SFJ66336.1
PELOTA RNA binding domain-containing protein.
 
   
 0.957
SFJ66348.1
Hydroxymethylpyrimidine pyrophosphatase.
 
     0.949
SFJ66275.1
Putative component of 'biosynthetic module'.
 
   
 0.916
SFJ37632.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.911
SFJ66230.1
Stress response protein SCP2.
 
     0.891
SFJ66215.1
Tellurium resistance protein TerD.
 
   
 0.872
SFJ66202.1
Tellurium resistance protein TerD.
 
   
 0.856
SFJ66287.1
Uncharacterized conserved protein YaaN involved in tellurite resistance; Belongs to the TelA family.
 
   
 0.843
citD
Citrate lyase subunit gamma (acyl carrier protein); Covalent carrier of the coenzyme of citrate lyase.
  
 
 0.812
Your Current Organism:
Terrisporobacter glycolicus
NCBI taxonomy Id: 36841
Other names: ATCC 14880, BCRC 14553, Clostridium glycolicum, Clostridium glycolinum, NCIMB 10632, NCTC 13026, T. glycolicus
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