STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ69513.1Nitroreductase family. (286 aa)    
Predicted Functional Partners:
SFJ48541.1
Uroporphyrinogen III methyltransferase / synthase.
  
 
 0.713
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.618
SFI91603.1
Hypothetical protein.
  
     0.585
SFJ69572.1
Protein of unknown function.
  
     0.538
SFJ28386.1
TolA-binding protein.
  
     0.534
SFJ17081.1
SIR2-like domain-containing protein.
  
     0.529
SFJ05559.1
Superfamily I DNA and RNA helicases.
  
     0.520
SFI91625.1
DNA helicase-2 / ATP-dependent DNA helicase PcrA.
  
     0.472
SFJ32901.1
Dienelactone hydrolase.
  
     0.459
SFJ29198.1
Zinc dependent phospholipase C.
  
     0.457
Your Current Organism:
Terrisporobacter glycolicus
NCBI taxonomy Id: 36841
Other names: ATCC 14880, BCRC 14553, Clostridium glycolicum, Clostridium glycolinum, NCIMB 10632, NCTC 13026, T. glycolicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.