STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ70994.1Hypothetical protein. (247 aa)    
Predicted Functional Partners:
SFJ27197.1
Uncharacterized protein.
  
 0.986
larC
Hypothetical protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family.
 
  
 0.935
SFJ34779.1
Nickel-dependent lactate racemase.
 
  
 0.790
SFJ22822.1
Nickel-dependent lactate racemase.
 
  
 0.787
SFJ25585.1
Nickel-dependent lactate racemase.
 
  
 0.780
SFJ14984.1
Cobalt/nickel transport system permease protein.
 
    0.756
SFI98357.1
Cobalt/nickel transport system permease protein.
 
    0.702
cbiM
Cobalt/nickel transport system permease protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
  
    0.644
SFJ22804.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
 
  
 0.534
groL
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
       0.458
Your Current Organism:
Terrisporobacter glycolicus
NCBI taxonomy Id: 36841
Other names: ATCC 14880, BCRC 14553, Clostridium glycolicum, Clostridium glycolinum, NCIMB 10632, NCTC 13026, T. glycolicus
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