STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC36526.1ABC-2 type transport system permease protein. (265 aa)    
Predicted Functional Partners:
SKC36518.1
ABC-2 type transport system ATP-binding protein.
 
  
 0.973
SKC36528.1
ABC-2 type transport system permease protein.
 
    
0.825
SKC87689.1
Radical SAM peptide maturase, CXXX-repeat target family/CXXX repeat peptide maturase.
  
     0.470
SKC42761.1
Protein of unknown function.
  
     0.431
SKC76367.1
Transcriptional regulator, TetR family.
 
     0.410
SKC65491.1
ABC-2 type transport system ATP-binding protein.
 
  
 0.407
SKC76362.1
Fluoroquinolone transport system ATP-binding protein.
 
  
 0.402
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.