Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKC36576.1 | SKC36579.1 | SAMN02194393_00169 | SAMN02194393_00170 | Hypothetical protein. | 4-oxalomesaconate hydratase. | 0.905 |
SKC36576.1 | SKC36587.1 | SAMN02194393_00169 | SAMN02194393_00171 | Hypothetical protein. | 4-carboxy-4-hydroxy-2-oxoadipate aldolase. | 0.893 |
SKC36576.1 | SKC84401.1 | SAMN02194393_00169 | SAMN02194393_04096 | Hypothetical protein. | Regulator of RNase E activity RraA. | 0.604 |
SKC36576.1 | SKC86306.1 | SAMN02194393_00169 | SAMN02194393_04512 | Hypothetical protein. | Regulator of RNase E activity RraA. | 0.591 |
SKC36579.1 | SKC36576.1 | SAMN02194393_00170 | SAMN02194393_00169 | 4-oxalomesaconate hydratase. | Hypothetical protein. | 0.905 |
SKC36579.1 | SKC36587.1 | SAMN02194393_00170 | SAMN02194393_00171 | 4-oxalomesaconate hydratase. | 4-carboxy-4-hydroxy-2-oxoadipate aldolase. | 0.989 |
SKC36579.1 | SKC69902.1 | SAMN02194393_00170 | SAMN02194393_02332 | 4-oxalomesaconate hydratase. | Mannose-1-phosphate guanylyltransferase. | 0.774 |
SKC36579.1 | SKC70221.1 | SAMN02194393_00170 | SAMN02194393_02399 | 4-oxalomesaconate hydratase. | tRNA nucleotidyltransferase (CCA-adding enzyme). | 0.853 |
SKC36579.1 | SKC76284.1 | SAMN02194393_00170 | SAMN02194393_02964 | 4-oxalomesaconate hydratase. | Fructoselysine 6-phosphate deglycase. | 0.741 |
SKC36579.1 | SKC84401.1 | SAMN02194393_00170 | SAMN02194393_04096 | 4-oxalomesaconate hydratase. | Regulator of RNase E activity RraA. | 0.890 |
SKC36579.1 | SKC86306.1 | SAMN02194393_00170 | SAMN02194393_04512 | 4-oxalomesaconate hydratase. | Regulator of RNase E activity RraA. | 0.885 |
SKC36579.1 | cysS | SAMN02194393_00170 | SAMN02194393_04732 | 4-oxalomesaconate hydratase. | cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.800 |
SKC36579.1 | dapB | SAMN02194393_00170 | SAMN02194393_00804 | 4-oxalomesaconate hydratase. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.751 |
SKC36579.1 | mgsA | SAMN02194393_00170 | SAMN02194393_03888 | 4-oxalomesaconate hydratase. | Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. | 0.847 |
SKC36587.1 | SKC36576.1 | SAMN02194393_00171 | SAMN02194393_00169 | 4-carboxy-4-hydroxy-2-oxoadipate aldolase. | Hypothetical protein. | 0.893 |
SKC36587.1 | SKC36579.1 | SAMN02194393_00171 | SAMN02194393_00170 | 4-carboxy-4-hydroxy-2-oxoadipate aldolase. | 4-oxalomesaconate hydratase. | 0.989 |
SKC69902.1 | SKC36579.1 | SAMN02194393_02332 | SAMN02194393_00170 | Mannose-1-phosphate guanylyltransferase. | 4-oxalomesaconate hydratase. | 0.774 |
SKC69902.1 | SKC76284.1 | SAMN02194393_02332 | SAMN02194393_02964 | Mannose-1-phosphate guanylyltransferase. | Fructoselysine 6-phosphate deglycase. | 0.767 |
SKC70221.1 | SKC36579.1 | SAMN02194393_02399 | SAMN02194393_00170 | tRNA nucleotidyltransferase (CCA-adding enzyme). | 4-oxalomesaconate hydratase. | 0.853 |
SKC70221.1 | dapB | SAMN02194393_02399 | SAMN02194393_00804 | tRNA nucleotidyltransferase (CCA-adding enzyme). | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.847 |
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