STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC37256.1Mannose-6-phosphate isomerase, class I. (577 aa)    
Predicted Functional Partners:
SKC37238.1
GntR family transcriptional regulator.
 
    0.875
SKC88057.1
PTS system, beta-glucosides-specific IIC component.
  
 
 0.873
SKC51123.1
PTS system, glucose subfamily, IIA component.
    
 0.869
SKC82969.1
PTS system IIA component, Glc family.
    
 0.869
SKC90067.1
PTS system IIA component, Glc family (TC 4.A.1).
    
 0.869
SKC37235.1
Sugar phosphate isomerase/epimerase.
 
     0.863
SKC69902.1
Mannose-1-phosphate guanylyltransferase.
  
 
 0.818
SKC79083.1
Alpha-phosphoglucomutase.
 
 
 0.810
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
    
 0.797
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.782
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.