STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC37290.1PTS system IID component, Man family (TC 4.A.6). (275 aa)    
Predicted Functional Partners:
SKC37284.1
PTS system, mannose-specific IIC component.
 0.998
SKC37280.1
PTS system, mannose-specific IIB component.
 
 0.996
SKC84510.1
PTS system, mannose-specific IIC component.
 0.994
SKC83081.1
PTS system, mannose-specific IIC component.
 0.993
SKC35714.1
PTS system, mannose-specific IIC component.
 0.991
SKC54405.1
PTS system, D-glucosaminate-specific IIC component.
 0.990
SKC89401.1
PTS system, mannose-specific IIC component.
 0.990
SKC37268.1
PTS system, mannose-specific IIA component.
 
 0.988
SKC69895.1
PTS system, mannose-specific IIC component.
 0.987
SKC85767.1
PTS system, mannose-specific IIC component.
 0.975
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.