STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC37730.1Pilus assembly protein CpaF. (412 aa)    
Predicted Functional Partners:
SKC37740.1
Tight adherence protein B.
 
  
 0.974
SKC37760.1
Tight adherence protein C.
 
  
 0.974
SKC37727.1
MinD-like ATPase involved in chromosome partitioning or flagellar assembly.
 
  
 0.956
SKC37820.1
Putative Flp pilus-assembly TadE/G-like.
 
     0.832
SKC37844.1
Forkhead associated (FHA) domain, binds pSer, pThr, pTyr.
 
  
 0.818
SKC37813.1
Hypothetical protein.
  
  
 0.772
SKC37825.1
Hypothetical protein.
  
  
 0.751
SKC37798.1
Putative Flagellin, Flp1-like, domain.
       0.711
SKC86833.1
Hypothetical protein.
  
  
 0.627
SKC78763.1
Flp pilus assembly protein TadB.
 
  
 0.610
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.