STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC38926.1Acetyltransferases. (147 aa)    
Predicted Functional Partners:
SKC91597.1
Sporulation protein YunB.
   
    0.735
SKC82909.1
Hypothetical protein.
  
     0.683
SKC82860.1
Protein of unknown function.
  
     0.668
SKC55638.1
tRNA threonylcarbamoyladenosine biosynthesis protein TsaB.
  
 0.649
SKC40065.1
MacB-like core domain-containing protein.
  
     0.634
SKC82929.1
Phage tail tube protein.
  
     0.630
SKC82914.1
Hypothetical protein.
  
   
 0.624
SKC90943.1
Transcriptional regulator, XRE family with cupin sensor.
  
 
 0.587
SKC55651.1
tRNA threonylcarbamoyladenosine biosynthesis protein TsaE.
  
 
 0.584
SKC35471.1
Asparagine synthase (glutamine-hydrolysing).
  
 
 0.579
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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