STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC40405.1Response regulator of the LytR/AlgR family. (124 aa)    
Predicted Functional Partners:
SKC65284.1
Two-component system, LytT family, sensor histidine kinase LytS.
 
 0.872
SKC41517.1
Two-component system, LytT family, sensor histidine kinase LytS.
 
 0.806
SKC65442.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.794
SKC40297.1
Sensor_kinase_SpoOB-type, alpha-helical domain.
 
 
 0.737
SKC39767.1
Putative regulator of cell autolysis.
 
 
 0.681
SKC40314.1
Accessory gene regulator B.
 
  
 0.656
SKC70812.1
PAS domain S-box-containing protein.
  
 
 0.645
SKC89083.1
Sensor_kinase_SpoOB-type, alpha-helical domain.
  
 
 0.632
SKC87641.1
Two component transcriptional regulator, LytTR family.
  
  
  0.628
SKC89080.1
Two component transcriptional regulator, LytTR family.
  
  
  0.625
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.