STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pxpAUPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. (255 aa)    
Predicted Functional Partners:
SKC40787.1
Sensor histidine kinase inhibitor, KipI family.
 
 0.999
SKC40803.1
Biotin-dependent carboxylase uncharacterized domain-containing protein.
 
 0.999
SKC40764.1
Uncharacterized protein YcsI, UPF0317 family; Belongs to the D-glutamate cyclase family.
    0.961
SKC40735.1
NRAMP (natural resistance-associated macrophage protein) metal ion transporters.
 
  
 0.865
SKC38950.1
Delta-1-pyrroline-5-carboxylate dehydrogenase.
   
 
  0.836
SKC76329.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
   
 
  0.836
SKC84490.1
Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
  0.836
SKC46407.1
NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
   
 
  0.755
SKC90921.1
NADPH-dependent glutamate synthase beta chain.
   
 
  0.755
SKC55208.1
Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
  0.740
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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