STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC41997.1Formate/nitrite transporter. (266 aa)    
Predicted Functional Partners:
SKC86376.1
Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.617
SKC42123.1
Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.565
SKC75590.1
uroporphyrinogen-III synthase.
  
  
 0.550
SKC84242.1
Glutamate synthase (NADPH/NADH) large chain.
   
  
 0.545
SKC86389.1
NAD(P)H-nitrite reductase.
 
 
 0.473
SKC41985.1
ECF transporter S component, folate family.
     
 0.468
SKC88341.1
Nitrite reductase (NADH) large subunit.
 
 
 0.458
SKC46066.1
Formate C-acetyltransferase.
 
  
 0.452
SKC83658.1
Formate dehydrogenase major subunit.
  
  
 0.437
SKC84815.1
NADH-quinone oxidoreductase subunit F.
  
  
 0.434
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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